Kong, Hwang, Kim, Zhang, Greenberg, Kohane, Park. CrossChip: a system supporting comparative analysis of different generations of Affymetrix arrays. BioinformaticsBioinformaticsBioinformatics. 2005;21:2116–7.
NOTES
Kong, Sek WonHwang, Kyu-BaekKim, Richard DZhang, Byoung-TakGreenberg, Steven AKohane, Isaac SPark, Peter Jeng5U01HL066582-04/HL/NHLBI NIH HHS/K25 GM067825/GM/NIGMS NIH HHS/K25 GM067825-02/GM/NIGMS NIH HHS/K25 GM067825-03/GM/NIGMS NIH HHS/K25-GM67825/GM/NIGMS NIH HHS/Research Support, N.I.H., ExtramuralResearch Support, Non-U.S. Gov'tResearch Support, U.S. Gov't, P.H.S.EnglandOxford, England2005/02/03 09:00Bioinformatics. 2005 May 1;21(9):2116-7. Epub 2005 Jan 31.
Abstract
SUMMARY: To increase compatibility between different generations of Affymetrix GeneChip arrays, we propose a method of filtering probes based on their sequences. Our method is implemented as a web-based service for downloading necessary materials for converting the raw data files (*.CEL) for comparative analysis. The user can specify the appropriate level of filtering by setting the criteria for the minimum overlap length between probe sequences and the minimum number of usable probe pairs per probe set. Our website supports a within-species comparison for human and mouse GeneChip arrays. AVAILABILITY: http://www.crosschip.org
Last updated on 02/25/2023